diff --git a/erpnext/erpnext_integrations/doctype/shopify_log/shopify_log.js b/erpnext/erpnext_integrations/doctype/shopify_log/shopify_log.js
index d3fe7d2b4d..12faeecc87 100644
--- a/erpnext/erpnext_integrations/doctype/shopify_log/shopify_log.js
+++ b/erpnext/erpnext_integrations/doctype/shopify_log/shopify_log.js
@@ -18,5 +18,8 @@ frappe.ui.form.on('Shopify Log', {
 				})
 			}).addClass('btn-primary');
 		}
+
+	let app_link = "<a href='https://frappecloud.com/marketplace/apps/ecommerce-integrations' target='_blank'>Ecommerce Integrations</a>"
+	frm.dashboard.add_comment(__("Shopify Integration will be removed from ERPNext in Version 14. Please install {0} app to continue using it.", [app_link]), "yellow", true);
 	}
 });
diff --git a/erpnext/erpnext_integrations/doctype/shopify_settings/shopify_settings.js b/erpnext/erpnext_integrations/doctype/shopify_settings/shopify_settings.js
index 1574795dfa..a926a7e52a 100644
--- a/erpnext/erpnext_integrations/doctype/shopify_settings/shopify_settings.js
+++ b/erpnext/erpnext_integrations/doctype/shopify_settings/shopify_settings.js
@@ -36,6 +36,10 @@ frappe.ui.form.on("Shopify Settings", "refresh", function(frm){
 		frm.toggle_reqd("delivery_note_series", frm.doc.sync_delivery_note);
 
 	}
+
+	let app_link = "<a href='https://frappecloud.com/marketplace/apps/ecommerce-integrations' target='_blank'>Ecommerce Integrations</a>"
+	frm.dashboard.add_comment(__("Shopify Integration will be removed from ERPNext in Version 14. Please install {0} app to continue using it.", [app_link]), "yellow", true);
+
 })
 
 $.extend(erpnext_integrations.shopify_settings, {
diff --git a/erpnext/patches.txt b/erpnext/patches.txt
index b2597470d4..0012641b66 100644
--- a/erpnext/patches.txt
+++ b/erpnext/patches.txt
@@ -296,3 +296,4 @@ erpnext.patches.v13_0.update_subscription_status_in_memberships
 erpnext.patches.v13_0.update_export_type_for_gst
 erpnext.patches.v13_0.update_tds_check_field #3
 erpnext.patches.v13_0.update_recipient_email_digest
+erpnext.patches.v13_0.shopify_deprecation_warning
\ No newline at end of file
diff --git a/erpnext/patches/v13_0/shopify_deprecation_warning.py b/erpnext/patches/v13_0/shopify_deprecation_warning.py
new file mode 100644
index 0000000000..8b0f1935cf
--- /dev/null
+++ b/erpnext/patches/v13_0/shopify_deprecation_warning.py
@@ -0,0 +1,15 @@
+import click
+import frappe
+
+
+def execute():
+
+	frappe.reload_doc("erpnext_integrations", "doctype", "shopify_settings")
+	if not frappe.db.get_single_value("Shopify Settings", "enable_shopify"):
+		return
+
+	click.secho(
+		"Shopify Integration is moved to a separate app and will be removed from ERPNext in version-14.\n"
+		"Please install the app to continue using the integration: https://github.com/frappe/ecommerce_integrations",
+		fg="yellow",
+	)